Package vcf
Interface RefGT
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- All Superinterfaces:
GT
- All Known Implementing Classes:
BasicRefGT
public interface RefGT extends GT
Interface
RefGT
represents phased, compressed, nonmissing genotype data for a list of markers and a list of reference samples.All instances of
RefGT
are required to be immutable.
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description RefGTRec
get(int marker)
Returns theRefGTRec
for the specified marker.
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Method Detail
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get
RefGTRec get(int marker)
Returns theRefGTRec
for the specified marker.- Parameters:
marker
- the marker index- Returns:
- the
RefGTRec
for the specified marker - Throws:
java.lang.IndexOutOfBoundsException
- ifmarker < 0 || marker >= this.nMarkers()
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